Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015812076.1_cds_XP_016496973.1_11143
CDS Infomation

[gene=LOC107815844] [db_xref=GeneID:107815844] [protein=zinc finger CCCH domain-containing protein 5-like] [partial=5'] [protein_id=XP_016496973.1] [location=complement(join(2453..3254,6859..7082,7304..7378,7677..7793,8379..8471,9678..9836,9980..10117,10244..>10396))] [gbkey=CDS]
Sequence

GTTGCTCTTGAGAATGAATCAGATGGAGATGACGAGTGGGAATATGTAGAAGATGGGCCT
CCCGAAATTATATGGCAAGGAAATGAGATAATTGTGAAGAGGAATAAAGTGAAAGTAAAA
AAGAAGGATCCCAATCATGTGATTGTTAAAGAGGATCCCAATAGGCCAACATCCAATCCA
CTGCCTCCACAATCTGAAGTATTTGCTGACTACAAGAATGCTTCATCTCTTTCAGCACAG
CAGTTGTTGGAGAATGTTGCTCTACAAACTCCGAATTTTGGAACTGAGCAGGATAAAGCT
CATTGTCCTTTCCACCTAAAAACTGGGGCTTGTAGATTTGGTTCACGCTGCAGTAGGGTT
CATTTTTATCCTGATAAATCCTGCACACTGCTCATGAAGAACATGTACGCTGGACCTGGT
CTTGCTTGGGAGCAGGATGAGGGGCTTGAGTGTACAGATGAGGAAGTTGAACGTAGTTAT
GAGGAATTCTATGAGGATGTTCACACAGAATTTTTGAAGTTTGGAGAAATTATAAATTTC
AAGGTGTGTAGAAACAGTTCATCTCATTTGCGAGGGAATGTTTATGTACACTACAAAGAT
ATAGATTCTGCGGTGCTTGCTTATCGTTCTATTAATGGCCGTTACTTTGCTGGCAAACAG
ATTACATGCGAGTTTGTTAGTGTAACAAAATGGAAGGTTGCCATATGTGGGGAATTCATG
AAATCGAAGCTTAAGTCATGCTCTCGTGGAACGACGTGCAACTTCATCCACTGTTTCCGC
AATCCTGGTGGGGATTATGAATGGGCAGATTTGGATAAACCACCGCCGAGATACTGGTTA
AAGAAGATGGCTGCTTTGTTTGGATACACTGATGAGTCTGTCTATGATAGACGGCTTGAA
CTGAAAAACTCAGAATGGACGTTGAATTCCTACAAGATGCCGACAGCTGATTCTGACAGA
ATTGACAGGCATCGCTCTGTAATGTCGGATTCAAGGGATAGAAGGTCTCGGTCAAGGGAG
AACAGAAGTTCTAGGATCCACTATAGGGATTATGATGGTCATAAGAGGGCACATCAAGAG
AGAGACGGCAGTATTGATAGGAAACGGCGCAAAATTCTTGATAAGAAACGATACGTAGAG
GAAACAGGACAACATGAAGAGGAAACAAATCAACATGGTAAAAATAGATATCATAGTAGT
GACTCTGATGGGGGTTTATCTGAGAGAGAGAGAGAGGGAGTTATTAGGCGCAGTCACAGC
AGAAGGAAAAGATCAAGAATCCACCATAATGAAAAAATGGGGCATCGACATTGTAATGGT
GACAGCAAAAGAGGGGTTAGCCATTCTGACTCTGATGATGATTTGCCTGAAAAGAGTAGA
TATAGAGATGCAGGATCTGGAAACAAAGGGAGGGGCTCAAGACATTGGAAGGAAGATCAA
AGTACAGATTCTAGTGATGAGTGGTTGAGTGAGATACGAGACAGAAATTGCCATCACAAG
AAAACTAAAAGAAGAAGCAGGTCTAGGCGTCATGACAGTGCTCCATCATCACCCGATCGC
CGGGATAAGAGAAGAGCAAGCCATGATAGTAATACTACTGGAGATTGGACTGCTGCTGCC
ACAGATAAAAGAAAGCCAAGTTCTAACAAGAGTGTCGATTCAGATAGGGATTACCAATAT
CATCATAATGAAGACATTGAGGAAAGAGGCCGATGGGAACCTGATGAAGGTGCTACTGCA
ACACTCTCTAAAAGTAGTTAA

Peptide Sequence

PEP ID

XP_016496973.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 5-like, partial [Nicotiana tabacum]
Sequence

VALENESDGDDEWEYVEDGPPEIIWQGNEIIVKRNKVKVKKKDPNHVIVKEDPNRPTSNP
LPPQSEVFADYKNASSLSAQQLLENVALQTPNFGTEQDKAHCPFHLKTGACRFGSRCSRV
HFYPDKSCTLLMKNMYAGPGLAWEQDEGLECTDEEVERSYEEFYEDVHTEFLKFGEIINF
KVCRNSSSHLRGNVYVHYKDIDSAVLAYRSINGRYFAGKQITCEFVSVTKWKVAICGEFM
KSKLKSCSRGTTCNFIHCFRNPGGDYEWADLDKPPPRYWLKKMAALFGYTDESVYDRRLE
LKNSEWTLNSYKMPTADSDRIDRHRSVMSDSRDRRSRSRENRSSRIHYRDYDGHKRAHQE
RDGSIDRKRRKILDKKRYVEETGQHEEETNQHGKNRYHSSDSDGGLSEREREGVIRRSHS
RRKRSRIHHNEKMGHRHCNGDSKRGVSHSDSDDDLPEKSRYRDAGSGNKGRGSRHWKEDQ
STDSSDEWLSEIRDRNCHHKKTKRRSRSRRHDSAPSSPDRRDKRRASHDSNTTGDWTAAA
TDKRKPSSNKSVDSDRDYQYHHNEDIEERGRWEPDEGATATLSKSS

Transcript Sequence

Gene sequence data has not been registered.